PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN04148.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family NAC
Protein Properties Length: 142aa    MW: 16282.8 Da    PI: 9.9185
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN04148.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM120.41.7e-371713013128
         NAM  13 elvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..kgelvglkktLvfy 109
                 elv +yLk+kv + +l++ ++i+e++++k++PwdLp      e+e yfFs++  ky++g+r+nrat+sgyWkatg dk+++++  ++++  + ktLvf 
  KHN04148.1  17 ELVLQYLKRKVFSCPLPA-SIIPELHVCKSDPWDLPGD---LEQERYFFSTKVAKYPNGNRSNRATNSGYWKATGLDKQIVTSkgNNQVFEMNKTLVFC 111
                 9*****************.89***************54...46799***********************************997777789********* PP

         NAM 110 kgrapkgektdWvmheyrl 128
                 +g+ p g++tdW+mheyrl
  KHN04148.1 112 RGKPPYGSRTDWIMHEYRL 130
                 *****************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100538.1415142IPR003441NAC domain
PfamPF023653.5E-1616130IPR003441NAC domain
SuperFamilySSF1019418.24E-4017135IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 142 aa     Download sequence    Send to blast
SLCLPPPLYT KNIISMELVL QYLKRKVFSC PLPASIIPEL HVCKSDPWDL PGDLEQERYF  60
FSTKVAKYPN GNRSNRATNS GYWKATGLDK QIVTSKGNNQ VFEMNKTLVF CRGKPPYGSR  120
TDWIMHEYRL ILNGSQSKVR PN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A4e-31613016140Stress-induced transcription factor NAC1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU6619150.0EU661915.1 Glycine max NAC domain protein (NAC15) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003535156.11e-92PREDICTED: NAC domain-containing protein 83-like
SwissprotQ9FY931e-63NAC83_ARATH; NAC domain-containing protein 83
TrEMBLA0A0B2P8Z51e-104A0A0B2P8Z5_GLYSO; NAC domain-containing protein 18 (Fragment)
STRINGGLYMA12G18996.14e-92(Glycine max)
STRINGGLYMA10G20830.24e-92(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF70434139
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13180.16e-65NAC domain containing protein 83
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]